Laura Kubatko
Arrival and Departure
May 25 - June 6, 2023
Institutional webpage
E-mail: kubatko.2 (at) osu (dot) edu
Twitter: @Laura_Kubatko
Lecture Material for 2023
Species Tree Estimation Lecture 2023 slides
Lab Material for 2023
Species Tree Lab 2023 slides
Species Tree 2023 Tutorial
Reading List 2023
Degnan, J and L Salter. 2005. Gene tree distributions under the coalescent process, Evolution 59(1): 24-37.
Kubatko, L and J Degnan. 2007. Inconsistency of phylogenetic estimates from concatenated data under coalescence, Systematic Biology 56(1): 17-24.
Kubatko, L, HL Gibbs, and EW Bloomquist. 2011. Inferring species-level phylogenies and taxonomic distinctiveness using multi-locus data in Sistrurus rattlesnakes, Systematic Biology,60(4): 393-409.
Chifman, J and L Kubatko. 2014. Quartet inference from SNP data under the coalescent model, Bioinformatics 30(23): 3317-3324
Peng, J., D. Swofford, and L. Kubatko. 2022. Estimation of speciation times under the multispecies coalescent, Bioinformatics 38(23): 5182-5190
Swofford, D. L. and L. S. Kubatko. Species tree estimation using site pattern frequencies, Chapter 4, pgs. 68-88, in Species Tree Inference: A Guide to Methods and Applications, edited by L. S. Kubatko and L. L. Knowles.
Links to resources from the workshop
Gene tree probability calculator
Site pattern probability calculator
My intro slide
Links to fun personal stuff
Biking Cincy to Cleveland, 2021 (Longgg video)
Appalachian Trail, 2022
SSB Presidential Address, 2022